Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., ABC-type oligopeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  528 bits (1360), Expect = e-154
 Identities = 263/534 (49%), Positives = 353/534 (66%), Gaps = 9/534 (1%)

Query: 11  LLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDL 70
           LL AG+  A+T+  ++AANVPAGT LA  QELVR NG+E ASLDPHK E   E N+I DL
Sbjct: 13  LLTAGILCASTA--AWAANVPAGTALADKQELVRNNGSEPASLDPHKVESDVEFNIISDL 70

Query: 71  LEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDP 130
            EGLV+    G V P +AE WE  DN  +TFH+R    WS+G  +TA D V+S+QR +DP
Sbjct: 71  FEGLVSVSPTGEVQPRLAEKWENKDNTVWTFHLRPGITWSDGTAITAEDVVWSWQRLIDP 130

Query: 131 ATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTT 190
            TASPY+ Y     + NA +I  G+K   TLG KA++D TL   L      F+ M+ H +
Sbjct: 131 KTASPYASYPGNMHIVNAADIAQGKKAPDTLGVKAINDATLEVTLTQPNAAFLAMLAHPS 190

Query: 191 VKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTY 250
           + P+ K  + +FGD+WTKPE+FV +GAY L +WVVNER+  +RNP+YWD+ +TV+NKVTY
Sbjct: 191 LVPVDKVLIGRFGDKWTKPEHFVSSGAYKLSQWVVNERIVAERNPRYWDNAHTVINKVTY 250

Query: 251 LPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKPPF 310
           LPI ++ +++NR+ +GEI I   +P+  F +LKK     + V  QL TYYY FN  +PPF
Sbjct: 251 LPITSEASDVNRYKAGEIDIVYTVPINQFAQLKKTLGSELDVSPQLATYYYEFNTTRPPF 310

Query: 311 DDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEA 370
           +D RVRKAL+ A+D+D+++  +LGQGQ+PA+ ++     G   + P Y      +RIAEA
Sbjct: 311 NDARVRKALNMALDKDIIAGKVLGQGQRPAWLISQPDIGGVKLQNPDYASWPLDKRIAEA 370

Query: 371 KKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTYLDTR 430
           KKLL EAGYN S+PL F LLYNTSE+H++IA A  SMWK +LGV+  L+NQEWKT LDT 
Sbjct: 371 KKLLNEAGYNASHPLSFNLLYNTSESHQRIAIAASSMWKKNLGVEAKLQNQEWKTMLDTM 430

Query: 431 RQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTSTSEEERQK 490
              NFD  R  W  DY++A++FL    + ++ N  QY + +YD  +  A  + S EER K
Sbjct: 431 HTHNFDAVRYAWIADYDDAATFLNNFRTGDSENTSQYSNPDYDRALLNAAKAKSAEERGK 490

Query: 491 LYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKI---YAKDLYIK 541
            Y  AE LL RD+P  P+Y YVR+ LV P VGG+      DK+   + KD+YIK
Sbjct: 491 FYQQAEDLLGRDVPAIPVYHYVRTHLVKPWVGGF----TPDKLGYYFTKDMYIK 540