Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  148 bits (373), Expect = 6e-40
 Identities = 137/505 (27%), Positives = 219/505 (43%), Gaps = 43/505 (8%)

Query: 25  SFAANVPAGTKLAPVQE-LVRGNGTEVASLDPHKTEGVPESNVIRDLLEG-LVNQDANGN 82
           + +A +PAG   A   + L+  +     S +P      P       +L   L+N D   N
Sbjct: 11  ALSALLPAGAAWAANSDTLIYCSEASPESFNPQIASSGPSFVASSQVLYNRLINFDPVKN 70

Query: 83  V-VPGVAESWETT-DNKTFTFHIRKDAKWSNGD------PVTAHDFVYSFQRAVDPATAS 134
             V  +AESW  + D KT+TF +RK  K+++           A D ++S  R  DP    
Sbjct: 71  TPVSSLAESWTISPDGKTYTFALRKGVKFNSNKYFKPTRDFNADDVIFSVLRQKDPK--H 128

Query: 135 PYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTVKPI 194
           PY          N +       DK     K VDD+ + F L      F+   G      +
Sbjct: 129 PY----HNVSQGNYEYFNDVGLDKLIQDVKKVDDYHVQFTLSEPNAAFLADWGMDFASIL 184

Query: 195 HKATVEKFGDQWTKPENF----VGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTY 250
                +    + T PEN     +G G YVL ++ V+  +    NP YW+ +    + +  
Sbjct: 185 SAEYADAMLKKGT-PENVDTWPIGTGPYVLQQYKVDSLIRYVANPNYWEGEVPTKHLIFS 243

Query: 251 LP--IENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKP 308
           +   +E ++A++    + E QI        F  +K     ++     L   Y  FN +K 
Sbjct: 244 ITPNVETRLAKLQ---TNECQIIPAPSPVQFDAIKNNKDLTLHSVDALNVGYLAFNTEKK 300

Query: 309 PFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIA 368
           PFD+V VR+AL+YA D+  + +A+       A    P    GF+ ++  Y    +K    
Sbjct: 301 PFDNVLVRQALNYATDKKAIVNAVFMGSGTVAKSPIPPNMLGFNKDLKDYSYDPEK---- 356

Query: 369 EAKKLLEEAGYNKSNPLKFTLL-----YNTSENHKKIATAIQSMWKTSLGVDIALENQEW 423
            AK LL++AG  K   +    +     YN   N ++IA  IQS W   +GV   + + EW
Sbjct: 357 -AKALLKQAGLEKGAEVTLWSMPVQRPYN--PNSRRIAEMIQSDW-AKVGVKAKIVSYEW 412

Query: 424 KTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNT----SNDPQYHSAEYDAVIEKA 479
             YL   R+G  D    GW  D  +  +F  ++L  N+    SN  ++    YDA+++KA
Sbjct: 413 GEYLSGMRKGEHDSALFGWMSDNGDPDNFADVLLGCNSIKTGSNAARWCDKGYDALVQKA 472

Query: 480 KTSTSEEERQKLYADAEKLLARDMP 504
           K ++S  ER KLY  A+++  +  P
Sbjct: 473 KLTSSPAERAKLYGQAQEIFYQQAP 497