Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., ABC-type oligopeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  531 bits (1368), Expect = e-155
 Identities = 266/530 (50%), Positives = 353/530 (66%), Gaps = 1/530 (0%)

Query: 12  LGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLL 71
           L A L +   S  S+AA+VP GT LA  QELVR    E ASLDP K  G+PE  VIRDL 
Sbjct: 8   LCAALYLCGLSTLSYAADVPQGTVLAQKQELVRHIKDEPASLDPAKAVGLPEIQVIRDLF 67

Query: 72  EGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDPA 131
           EGLVNQ+  G + PGVA  W++ DN+ +TF +R +AKWS+G PVTA DFVYS+QR VDP 
Sbjct: 68  EGLVNQNEKGELTPGVATRWQSNDNRIWTFTLRDNAKWSDGTPVTAQDFVYSWQRLVDPK 127

Query: 132 TASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTV 191
           T SP++W+     + NA+ II G+    TLG  AVD  TL  +L+  +P+F  +  +   
Sbjct: 128 TTSPFAWFAALAGINNAQAIIDGKAAPDTLGVTAVDARTLRVQLDKPLPWFSNLTANFAF 187

Query: 192 KPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTYL 251
            P+ KA VE  G +WT+P   VGNGAYVL+  VVNE+L +  N  YWD+  TVL KVT++
Sbjct: 188 YPVQKANVES-GKEWTRPGALVGNGAYVLNDRVVNEKLVVVPNTHYWDNAKTVLQKVTFI 246

Query: 252 PIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKPPFD 311
           PI  + +   R+L+G+I IT   P   +++L K+ P  V    QL TYYY FN +K P  
Sbjct: 247 PINQESSATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQKGPTA 306

Query: 312 DVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEAK 371
           D RVR ALS  IDR ++++ +LG G+KPA+  TP++TAGF+PE   + +M+Q+E  A+AK
Sbjct: 307 DARVRLALSMTIDRRIMAEKVLGTGEKPAWHFTPDVTAGFTPEPSPFEQMSQQELNAQAK 366

Query: 372 KLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTYLDTRR 431
            LL+ AGY    PLK TLLYNTSENH+KIA A+ SMWK +LGVD+ L+NQEWKTY+D+R 
Sbjct: 367 TLLQAAGYGPQRPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRN 426

Query: 432 QGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTSTSEEERQKL 491
            GNFDV RA W GDYNE S+FL+L+ S+++ N  +++   YD +I +A   T+ + R   
Sbjct: 427 TGNFDVIRASWVGDYNEPSTFLSLLTSTHSGNISRFNEPAYDKIIHQATLETTAKARNTD 486

Query: 492 YADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYIK 541
           Y  AEK+L    PIAPIYQY   RL+ P V GYP NN ED  Y++ +YI+
Sbjct: 487 YNMAEKILMEKAPIAPIYQYTNGRLIKPWVKGYPINNPEDVAYSRTMYIE 536