Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., ABC-type oligopeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  591 bits (1524), Expect = e-173
 Identities = 291/537 (54%), Positives = 375/537 (69%), Gaps = 2/537 (0%)

Query: 6   ITQALLLGAGLAVATTSFTS-FAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPES 64
           IT+  L+ AG+  A  +  +  AA+VPAG +LA  Q LVR NG EV SLDPHK EGVPES
Sbjct: 4   ITKKNLVAAGILTALIAGNAAMAADVPAGVQLAEKQTLVRNNGAEVQSLDPHKIEGVPES 63

Query: 65  NVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSF 124
           NV RDL EGL+  D +G+  PGVAE WE  D K +TFH+RKDAKWS+G PVTA DFVYS+
Sbjct: 64  NVNRDLFEGLLVTDVDGHPAPGVAEKWENKDFKVWTFHLRKDAKWSDGTPVTAEDFVYSW 123

Query: 125 QRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVM 184
           QR  +P TASPY+ Y++Y  + N  +IIAG+K  + LG KA+D +T    L   VPYF  
Sbjct: 124 QRLANPTTASPYASYLQYGHIANIDDIIAGKKPVTDLGVKAIDANTFEVTLSEPVPYFYK 183

Query: 185 MMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTV 244
           ++ H +V P+ K+ VEKFG++WT+P N V NGAY L  WVVNER+ L RNPQYWD+  TV
Sbjct: 184 LLVHPSVSPVPKSAVEKFGEKWTQPANIVTNGAYKLKDWVVNERMVLDRNPQYWDNAKTV 243

Query: 245 LNKVTYLPIENQVAEMNRFLSGEIQIT-NELPLEHFKRLKKEHPESVQVQGQLCTYYYGF 303
           +++VTYLPI ++V ++NR+ SGEI +T N +P+E F++LKKE P+ V V   LCTYYY  
Sbjct: 244 IDQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPKEVHVDPYLCTYYYEI 303

Query: 304 NNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQ 363
           NN+K PF DVRVR AL  A+DRD++ + +  QG  PAY  TP  T G     P + K TQ
Sbjct: 304 NNQKAPFTDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPYTDGAKLTEPEWFKQTQ 363

Query: 364 KERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEW 423
           ++R AEAKKLL EAGY    PL F+LLYNTS+ HKK+A A+ S+WK +LG ++ LENQEW
Sbjct: 364 EQRNAEAKKLLAEAGYTADKPLTFSLLYNTSDLHKKLAIAVASIWKKNLGANVKLENQEW 423

Query: 424 KTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTST 483
           KT+LD+R QG FDV RAGWC DYNE +SFL  MLS +++N   Y S  +D +I     +T
Sbjct: 424 KTFLDSRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLIGDTLKTT 483

Query: 484 SEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYI 540
            E +R++LY+ AE+ L +D  I P+Y YV +RLV P VGGY   +  D IY K+LYI
Sbjct: 484 DEAQRKELYSQAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPMDNIYVKNLYI 540