Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., peptide ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  543 bits (1400), Expect = e-159
 Identities = 270/534 (50%), Positives = 356/534 (66%), Gaps = 2/534 (0%)

Query: 9   ALLLGAGLAVATTSFT--SFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNV 66
           A+ +G   AV  T+    + AA VP+G  LA  QE+VR    E ASLDP K  G+PE  V
Sbjct: 7   AVSVGVVSAVLMTALMGPAGAAQVPSGAVLADRQEIVRHIKDEPASLDPIKAVGLPEIQV 66

Query: 67  IRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQR 126
           IRDL EGLVNQDA GN +PGVA+ W+T DN+TF F +R DA+WSNGDPVTA DFVYS++R
Sbjct: 67  IRDLFEGLVNQDAQGNPIPGVAQRWQTNDNRTFIFTLRPDARWSNGDPVTAKDFVYSWRR 126

Query: 127 AVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMM 186
              P   SP+SW++    + NA +I+AG+     LG  AVDDHTL  +L   VPYF+ +M
Sbjct: 127 LATPQNTSPFSWFIRLAGVVNADDILAGKLPADKLGVIAVDDHTLKVQLSKPVPYFISLM 186

Query: 187 GHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLN 246
            + ++ P+H+ATVEK+G++WTKP N VGNGA+VL   VVNE+L L  N  YWD  NT L 
Sbjct: 187 ANFSLYPVHQATVEKYGNEWTKPGNLVGNGAFVLKDRVVNEKLVLVPNNHYWDHANTRLT 246

Query: 247 KVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNK 306
           +VT++PI  +     R+ +G+I IT   P   +++L K+ P  V    QL TYYY FN +
Sbjct: 247 QVTFVPINQESNATKRYQAGDIDITESFPKNQYQKLLKDLPGQVFTPDQLGTYYYAFNTQ 306

Query: 307 KPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKER 366
           + P  D RVRKALSYAIDR +++  +LG G+KPAY  TP++TAGF+P+     + +Q E 
Sbjct: 307 RAPTSDARVRKALSYAIDRKIIAGKVLGTGEKPAYRFTPDVTAGFTPQPGQLQQYSQAEL 366

Query: 367 IAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTY 426
             +AK L+  AGY  S PLK TLLYNT E H+KIA A+ SMWKT LGVD+ L NQEWKTY
Sbjct: 367 DMQAKALMAAAGYGPSKPLKLTLLYNTQEVHQKIAIAVASMWKTKLGVDVKLVNQEWKTY 426

Query: 427 LDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTSTSEE 486
           +D+R  GNFDV RA W GDYNE S+FL+L+ +S++ N  ++++ +YD ++      T  +
Sbjct: 427 IDSRNTGNFDVIRASWIGDYNEPSTFLSLLTASHSGNIARFNNPDYDRLMADTAGQTDRK 486

Query: 487 ERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYI 540
              + Y  AE++LA   PIAPIYQY   RL+ P V GYP  N ED  Y++ LYI
Sbjct: 487 VLNEDYNRAEQILAEQAPIAPIYQYTNGRLIKPWVKGYPITNPEDVAYSQTLYI 540