Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  151 bits (382), Expect = 5e-41
 Identities = 134/513 (26%), Positives = 229/513 (44%), Gaps = 52/513 (10%)

Query: 22  SFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLVNQDANG 81
           SF   A    A    A  + L  G   ++ SLDP+          +  + EGLV    + 
Sbjct: 6   SFVLAAMAAAAIAVPAHAETLRWGGRADLYSLDPYSVPSTSNLAFLNHIYEGLVRYGPDF 65

Query: 82  NVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDPATASPYSWYME 141
            + P +A  W+  D K + F +RK  K+ +G   TA D V SF RA D    SP      
Sbjct: 66  QIEPALATEWKLIDGKAWRFTLRKGVKFHDGSDFTADDVVASFTRASD--ATSP------ 117

Query: 142 YTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTV-----KPIHK 196
              ++    + A        G K VDD+T+  +LE + P  + +   T +     K +  
Sbjct: 118 ---LRGNIPVFA--------GVKKVDDYTV--DLEVSAPTSLFLNDITNIFIFNAKWLKD 164

Query: 197 ATVEKFGDQWTKPENFV-----GNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTYL 251
              EK  D  +K + +      G G + L+  V + +  L  N  +WD K   L+++ ++
Sbjct: 165 NNSEKPTDFASKVDGYTTMHTNGTGPFKLESRVPDSKTVLVANEGWWDQKKHNLDRIEFV 224

Query: 252 PIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNK----- 306
           PI +    +   LSGEI + +  P++   RL+     SV+ + +L T + GFN +     
Sbjct: 225 PIASAATRVAALLSGEIDLIDSAPIQDLPRLESSPNISVKKRTELRTLFIGFNRREKLED 284

Query: 307 -KP-PFDDVRVRKALSYAIDRDVVSDAIL-GQGQKPAYFLTPEITAGFSPEMPAYGKMTQ 363
            KP PF+D+RVR+A   +IDRD+++  ++ G  +     + PEI AG++  +  +    +
Sbjct: 285 GKPNPFNDLRVRQAFEASIDRDLINKKVMRGLARPSGSLIAPEI-AGYAKSLDTF----E 339

Query: 364 KERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEW 423
               A+A+KLL +AG  K+    +T + + S N + I + + +M K   G    ++    
Sbjct: 340 PADPAKAQKLLADAGM-KNLAFTYTCMNDESVNEEDICSGVANMLKRG-GFQPTIDIAPR 397

Query: 424 KTYLDTRRQGNFDVTRAGWCGDYN-EASSFLTLMLSS-----NTSNDPQYHSAEYDAVIE 477
                 R  G  DV    W  +   +A S L+ +LS+       SN   + + E D ++ 
Sbjct: 398 SVQSPKRNGGKADVFNLSWANEPTLDAFSMLSQILSTRKGAMGVSNYGGWSNPEIDKLVA 457

Query: 478 KAKTSTSEEERQKLYADAEKLLARDMPIAPIYQ 510
           +A       +R  L   A K+   +  + P++Q
Sbjct: 458 QAAQEQDNTKRLALEEAALKIAKDETMLVPLHQ 490