Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score = 76.3 bits (186), Expect = 4e-18
 Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 30/300 (10%)

Query: 232 QHQLEQWNLELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFA 291
           Q  L + N  LE++V  RT  L A +  +     +    +++L + +KM +IG L    A
Sbjct: 270 QDALTRMNEILEERVAARTAELTASHAAVLAEMEQRKRAEEQLRQVQKMETIGQLTGNVA 329

Query: 292 HEINNPNGALKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGI 351
           H+ NN   A+  +L+LL++           +D    G+      TQ   A    +     
Sbjct: 330 HDFNNLLTAVIGNLELLRKRVANDPRAVRLVDGACQGAQRGAALTQRLLAFARRQDLKVE 389

Query: 352 EESLRDALHCVDRIKTIVDKVQRC---QAEPALHDSSWVSPLSLVEQAIQICGLREWVVW 408
             SL D       +   VD ++R    + E  LH S    P  +    I++  L      
Sbjct: 390 PRSLTDL------VSGAVDLIERSIGSRIELRLHLSQDSPPALVDANQIELALL------ 437

Query: 409 KEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFG 468
                         N  V A  A+ N    + + D P       L  +   + + V D G
Sbjct: 438 --------------NLVVNARDAMPNGGVVSISVDHPQAAPGAGLP-EGPYVRLTVSDTG 482

Query: 469 RGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLP 528
            GM  E  + A +PFF+T + GKG GLGL+  +    + +G ++L SE+  GTR  + LP
Sbjct: 483 YGMDAETLEKATEPFFSTKEQGKGTGLGLSMVHGLAVQLNGALRLSSEVGAGTRAELWLP 542