Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 99.8 bits (247), Expect = 3e-25
 Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 27/287 (9%)

Query: 259 QLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFN-QLKV 317
           +++++  +L+L ++ +V++EKM+S+G LAAG AHEINNP GA+  ++Q +++  +  L  
Sbjct: 390 RIDDITQRLSL-EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPK 448

Query: 318 GFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQA 377
             E         +   ++ Q++    L     GI+++   A   V  + +   +  R  A
Sbjct: 449 NLEHAQQAGIELETVNRYLQSREVPQL---LDGIQQAGARAAKIVTHMLSFSRRSNRQMA 505

Query: 378 EPALHDSSWVSPLSLVEQAIQICG----LREWVVWKEQTLY----PPL--IYCYSNDFVT 427
              L         +L++QA++I G    L     +K Q +     P L  +   +N+   
Sbjct: 506 PCDLP--------ALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPQLGPVPGTANELEQ 557

Query: 428 ALSAILNNAYQAY---ASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFF 484
            L  +L NA QA      D    RI L  R +    EI+V D G GMS   ++  F+PFF
Sbjct: 558 VLLNLLKNAAQAIHLREDDSEPGRIILRTRLNPPWAEIQVEDNGIGMSENVRKRTFEPFF 617

Query: 485 TTHDVGKGVGLGLTEAYSSI-KKYDGDIQLFSELRQGTRVLITLPLA 530
           TT ++G+G GLGL+ +Y  I   + G +++ S L QGT   + LPLA
Sbjct: 618 TTKEIGQGTGLGLSVSYFIITNNHKGQMEVHSTLGQGTCFTLRLPLA 664