Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 41/281 (14%)

Query: 266 KLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQIDIL 325
           K  + K ++ + EK+ S+G LAAG AHEINNP G + S+   L +   Q++    QI  +
Sbjct: 172 KTVIDKHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQ-HPQIQPI 230

Query: 326 LSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQ------RCQAEP 379
                             L E  +  E  L ++L  + RIK IV  +          AE 
Sbjct: 231 ADPR--------------LHEMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHENMAEI 276

Query: 380 ALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPP------LIYCYSNDFVTALSAIL 433
            + D    S L+L+   ++         ++ Q +YP       +   Y+      ++ I+
Sbjct: 277 DMRDVL-SSALALIIGDLK---------YRAQFVYPAPEKPYYIRGSYNKLQQVFINLII 326

Query: 434 NNAYQAYASDDPMIRIEL-SLRHDHQ---QLEIEVRDFGRGMSIEEKQHAFDPFFTTHDV 489
           N      A+ + ++R+EL  +R   +   ++++ + D G+G+S E  +  FDPFFTT  V
Sbjct: 327 NAVQSVSATQEGVVRLELCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKV 386

Query: 490 GKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLPLA 530
           G G GLGL+ A   I+++ G I+L S    GTRV +TLP A
Sbjct: 387 GDGAGLGLSVAREIIEEHHGKIKLCSTEGVGTRVFVTLPQA 427