Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 85/286 (29%), Positives = 146/286 (51%), Gaps = 27/286 (9%)

Query: 259 QLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQ-LKV 317
           +++++  +L+L ++ +V++EKM+S+G LAAG AHEINNP GA+  ++Q +++  +  L  
Sbjct: 390 RIDDITQRLSL-EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSSDLPR 448

Query: 318 GFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQA 377
             EQ + L  G D      +  ++  + +   GI+++   A   V  + +   +  R   
Sbjct: 449 NQEQAEEL--GIDL-ATINRYLDSREVPQLLDGIQQAGARAAKIVTHMLSFSRRSNRQLV 505

Query: 378 EPALHDSSWVSPLSLVEQAIQICG----LREWVVWKEQTLY----PPL--IYCYSNDFVT 427
              L         +L++QA++I G    L     +K Q +     P L  + C +N+   
Sbjct: 506 PCELP--------ALIDQALEIAGNDFDLAIGFDFKGQAIVRQFDPDLGPVPCTANELEQ 557

Query: 428 ALSAILNNAYQA-YASDDPMI--RIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFF 484
            L  +L NA QA +    P    RI L  R +    E++V D G GM    ++  F+PFF
Sbjct: 558 VLLNLLKNAAQAIHQRPQPSEPGRITLRTRLNPPWAEVQVEDNGVGMPEAVRKRTFEPFF 617

Query: 485 TTHDVGKGVGLGLTEAYSSI-KKYDGDIQLFSELRQGTRVLITLPL 529
           TT ++G+G GLGL+ +Y  I   + G +++ S   QGT   + LPL
Sbjct: 618 TTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSTPGQGTCFTLRLPL 663