Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Signal transduction histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 40/279 (14%)

Query: 256 KNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQL 315
           KN  L ++N  L  +K +L++ EKM +IGTL+AG  HE+NNP      +  L+  +    
Sbjct: 196 KNASLRDINNTLAEVKGQLLQREKMAAIGTLSAGLLHELNNP-----VNYSLMAINMGLT 250

Query: 316 KVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRC 375
             G +  ++L                          +ESL DA   + RI+ IV  ++  
Sbjct: 251 CKGVQDDEML--------------------------KESLIDAREGMQRIQNIVTDLKTF 284

Query: 376 QAEPALHDSSWVSPL-SLVEQAIQICGLREWVVWKEQTLYPPLIYCYSND--FVTALSAI 432
             +    DS     L + V  A+++ G     +    +L P   +   ++   +  L  +
Sbjct: 285 AYQKPGQDSMRSFLLENAVRSAVRLAGYELKGIDVAVSL-PQDSHVLGDEPAIIGVLINL 343

Query: 433 LNNA---YQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDV 489
           L+NA    Q    + P  RI +++    Q++ + VRD G G++ +     F+PFFTT DV
Sbjct: 344 LSNAALALQVAKREQP--RIAVTVTEGAQRVGVSVRDNGSGIAPDNLTRVFEPFFTTRDV 401

Query: 490 GKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLP 528
           G G+GLGL+ +Y  ++++ G + + SE    T     LP
Sbjct: 402 GAGLGLGLSVSYGIVQRHGGTLAVESEQGSWTEFTFDLP 440