Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., Signal transduction histidine kinase HoxJ (hydrogenase regulation) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 84.7 bits (208), Expect = 6e-21
 Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 26/296 (8%)

Query: 246 VNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHL 305
           V + T  L     ++   +  L   + +L+ +EKM S+G L AG AHE+NNP   +  ++
Sbjct: 164 VGRPTAELKRAYHEMRAAHEALKRTQQQLLHSEKMASLGQLVAGVAHELNNPISFVLGNV 223

Query: 306 QLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRI 365
             L +   +L+         +   +      + +  L +E   + +   +   L    R 
Sbjct: 224 HALSKYSERLRSYLAA----MHAHEPEAVLDEMRRKLRIEHLLADLPSLIEGTLEGAQRT 279

Query: 366 KTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPL-IYCYSND 424
             IV  ++R  A     DS    P++LVE       +   + W ++    P+ +   + +
Sbjct: 280 ADIVHGLKRFSAM----DSEERKPVNLVEV------IERAIHWVQKGRSAPVEVQWQAGE 329

Query: 425 FVTALSA----------ILNNAYQAYASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIE 474
             T + +          +L N + A    +   RI +SL      + + +RD G G+  E
Sbjct: 330 TCTVMGSAGQLQQVMMNLLQNGFDAVGQREAP-RIVVSLERADGTVRVTLRDNGPGIPPE 388

Query: 475 EKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLPLA 530
                FDPFFTT  VGKG GLGL+ +Y  ++++ G +   +    G   ++ LP A
Sbjct: 389 HLLRIFDPFFTTKPVGKGTGLGLSISYGIVEQHGGRLSARNAAEGGAEFILELPQA 444