Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 88.6 bits (218), Expect = 7e-22
 Identities = 91/321 (28%), Positives = 139/321 (43%), Gaps = 32/321 (9%)

Query: 224 SEATMRDYQHQLEQWNLELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISI 283
           +E   R  Q +L   + +LE  V +RTE L  K  Q+E +            +  +M S+
Sbjct: 341 AEERARQAQLELADQHAQLERLVEERTEAL--KQAQIEAL------------QASRMASV 386

Query: 284 GTLAAGFAHEINNPNGALKSHLQLLQQD----FNQLKVGFEQIDILLSGSDFHGK---FT 336
           G LAAG AHEIN P   +  +L  +Q      F  L       +    G    GK   F 
Sbjct: 387 GQLAAGIAHEINTPIQYVGDNLAFIQSAAEAVFPLLSEARALAESWRVGEGDAGKTEEFL 446

Query: 337 QTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQA 396
           Q  +A  L+        ++  +L  V ++  IV  ++   + P     + V     ++  
Sbjct: 447 QHYDAAGLDFLMEETLPAVTQSLEGVAQVARIVLSMKEF-SHPGTSQKTAVDINRALDST 505

Query: 397 IQICGLREWVVWKEQTLYPP---LIYCYSNDFVTA-LSAILNNAYQAYASDDPM---IRI 449
           + +C      V + +T + P   L+ C+  +     L+ I+N A+    S  P+   I  
Sbjct: 506 LVVCRNTWKHVARMETRFDPALPLVNCHPGEMNQVFLNLIVNAAHAIEESGKPLPGTITA 565

Query: 450 ELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYS-SIKKYD 508
           E +L  D    EI + D G G+S E  QH FDPFFTT +VGKG G GL   Y   + K+ 
Sbjct: 566 ETALCGDWA--EIRISDSGTGISDEIAQHIFDPFFTTKEVGKGTGQGLAICYDVVVNKHG 623

Query: 509 GDIQLFSELRQGTRVLITLPL 529
           G I +  E   G    I +P+
Sbjct: 624 GQIVVGGEPEHGAIFTIRIPV 644