Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 704 a.a., Adaptive-response sensory-kinase SasA from Azospirillum sp. SherDot2

 Score = 85.9 bits (211), Expect = 5e-21
 Identities = 104/420 (24%), Positives = 172/420 (40%), Gaps = 67/420 (15%)

Query: 123 VIEVSGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLGEMGLVALFSYLLGNALTRRLTE 182
           +++  G   G +++GF  + L+  L  A    +L  L    L  L       A+ R L  
Sbjct: 316 LLDTEGRRIGMLYVGFLEAPLQDALYRAMTGLVLAFLAVSALGTLADLRFAQAIFRPLER 375

Query: 183 LKTATDQITFGNREVLL-EIQGHDEISRVAHSFQQMVQSLRHSEATMRDYQHQLEQWNLE 241
           +      I  G+        +  DE+ R++ +F Q++ SL    A   + Q   E    +
Sbjct: 376 MNRVIATIEAGDETARAGPSRSRDELGRLSRAFDQLLDSLA---ARRLELQRSAE----D 428

Query: 242 LEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGAL 301
           L+ KV +RT        +LE  N  L     +LV +EK+ +IG L AG AHEINNP   +
Sbjct: 429 LDRKVAERTA-------ELESANATLRQASRQLVLSEKLAAIGQLTAGVAHEINNPVAVI 481

Query: 302 KSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHC 361
           + +L LL +                                 L ++ + +++ +R     
Sbjct: 482 QGNLDLLGE--------------------------------VLGDAAAPVKDEIRLIDEQ 509

Query: 362 VDRIKTIVDKVQRC--------QAEPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTL 413
             RI+TI+ K+ +         QAEP   ++  +  L L    +   G R   V    T 
Sbjct: 510 TRRIQTIIAKLLQFARPGDYAGQAEPVDVNAVVLDCLLLTRHTM---GRRRIAVETSLTA 566

Query: 414 YPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIRIELS----LRHDHQQLEIEVRDFGR 469
             P +     +    L  ++ NA QA   D   + IE +      +    + + V D G 
Sbjct: 567 TVP-VEISRGELQQVLVNLMVNAVQA-MPDGGTLTIETADTRFPENGEAGVVLSVHDTGH 624

Query: 470 GMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLPL 529
           G+  +     FDPFFTT    +G GLGL+ +++ +++  G I + S  R G R   T+ L
Sbjct: 625 GIQPDCLGRVFDPFFTTKK-SEGTGLGLSISFAIVQRQGGHIAVQS--RPGLRTTFTVTL 681