Pairwise Alignments

Query, 447 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  201 bits (512), Expect = 3e-56
 Identities = 137/453 (30%), Positives = 227/453 (50%), Gaps = 35/453 (7%)

Query: 3   MDNMHDEKLNVLLLDDENDILKALNRVLR-MDYNVVTFDNGADALEYLQENPIHIIISDM 61
           MD     K  +LL+DDE  IL +L R+LR   ++VV   +GA ALE +   PI +++SD 
Sbjct: 1   MDEQLATKPTILLVDDEESILNSLRRLLRGQPFDVVLAGSGAQALEIMAAQPIDLVMSDA 60

Query: 62  RMPEMDGADFLAKAREMQPDTVRLLLTGYADIQSTVRAVNAGGIHTYISKPWDNENLKLI 121
           RMP MDGA  LA+   + P T R+LLTGYAD+ + V+A+N G IH YISKPW++E L+L+
Sbjct: 61  RMPGMDGAQLLAEVHRLYPATSRILLTGYADLPTIVKAINEGQIHRYISKPWNDEELQLV 120

Query: 122 VGKAAEFYRLSRDKERLTIELEERNKELEVANQALAENNHKLAQFNQELEAKVQERTVAL 181
           + +  E  RL    ERLT                    N +L Q N  LE +V  RT  L
Sbjct: 121 LRQTLEHQRL----ERLT-----------------QVQNDQLKQLNATLEKRVAARTSEL 159

Query: 182 QESNKRLESLLASRNKTFKDILAMVTAIIQHRTGFPADHAERIANQAKSVALKLKLSEAV 241
           Q++   L+        ++     + + +   R          +    +       + +A 
Sbjct: 160 QQTADMLDLAYDELKHSYVTGTEVFSLLANLRLPKNKQTNRSLIELVRVYCAAQSIDDAS 219

Query: 242 ASHVYLCGLMHQIGLIAETSNDWKVVKVHQDSEIPITPNVN----PILGAEIVGRIKRFE 297
           +  + +   ++ IG ++ + +    + +    ++  T        P     ++  ++  +
Sbjct: 220 SRDLTMAAALYNIGKLSWSDS----MLIEPADKLHSTDRERYRSYPTQSESLLMTLEPMK 275

Query: 298 PLMEIIRHQDELYDGTGKPDHLRGEQIPIGARIIKVVKDYDFFVAGANNPRRMHTKSAQG 357
               IIRH  E +DG+G PDHL+G+ IP G+R++K+  D+     G    R+M++  A  
Sbjct: 276 DAARIIRHHQERWDGSGFPDHLKGDAIPFGSRLLKLAVDFIELQKGLILERQMNSDEALL 335

Query: 358 YLRQQSEVYYDPKVVEAFI----TIVSAVTRIEEGMELCVSLSEVRPGMVIKRDIYLPNG 413
           Y+R+ +   YDP++VE F+    T +S VT  +  +++ ++  E+  GMV+ R++   NG
Sbjct: 336 YIRKYAGRLYDPELVEDFVLACATFLSDVTLGDPTVKV-LTTRELADGMVLARNLNADNG 394

Query: 414 NLMLTAGNAMSEPLLRKLKELEQEMNMPIPVYI 446
            L+L AG  ++ PL+ KL   E        V+I
Sbjct: 395 MLLLNAGKVLNLPLVDKLIAFEAMEGAKYNVFI 427