Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., putative cyclic di-GMP phosphodiesterase PdeB from Xanthobacter sp. DMC5

 Score =  108 bits (271), Expect = 4e-28
 Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 7/234 (2%)

Query: 290 LQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTEVM 349
           L+ G   A YQP   + +G  +  EAL R     G    PD F P+ E+  LI  LT+ M
Sbjct: 249 LKKGELVAHYQPIIELATGRCIGAEALVRWPRADGSQTPPDMFIPLAEETGLIGRLTDQM 308

Query: 350 VRDILTFLMTEDAVLQD--ITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHALHRLSVEI 407
           +  ++  L   D +  D    + +N+    +T G    +L  V +    Q    ++ +E 
Sbjct: 309 LSAVIEDL--GDLLRDDPHAHVSINLSAVDITTGRILPVLERVLDGSGIQP--RQIWLEA 364

Query: 408 TEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLG 467
           TE   I D D A+  + +L+  G R A+DDFGTGYSG  Y+  +P D++KID  +I ++ 
Sbjct: 365 TERSFI-DVDGARATLLELRRRGHRTAIDDFGTGYSGLNYIQNLPIDLLKIDRSFITAVN 423

Query: 468 KAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAI 521
               +  +   +I+    L +Q+IAE V+++ Q + L+  G    QG+L S A+
Sbjct: 424 TEAPTRDVTPYIIAMGHELKLQIIAEGVETENQAEYLRTQGVSFAQGWLYSKAL 477