Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1256 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  108 bits (269), Expect = 2e-27
 Identities = 80/257 (31%), Positives = 127/257 (49%), Gaps = 11/257 (4%)

Query: 285  NIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPT 344
            ++ R L    F   +QP  ++ +G +   EAL R          P+RF P+ E+  LI  
Sbjct: 987  DLRRALARDEFILNFQPVVNLATGRITGTEALVRWQSPTHGLVTPNRFIPLAEETGLIEP 1046

Query: 345  L----TEVMVRDILTFLMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHAL 400
            L     E   R +  +L   D       I VN+  +    G+    +  V   ++     
Sbjct: 1047 LGNWVMEAACRQMAEWL---DKGADLDFIAVNLSPRQFQRGALCEFVDDVL--RRTGLPA 1101

Query: 401  HRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDG 460
            H+L VEITE  L     AA+ ++ +LK  G+R ALDDFGTGYS   YL   P   +KID 
Sbjct: 1102 HKLEVEITESLLFDARAAAERKLRQLKDTGVRIALDDFGTGYSSLAYLKRFPISKLKIDR 1161

Query: 461  RYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPA 520
             +++ L +A +   I  ++IS  ++L   V+AE ++  +Q+  L+  GCD  QG+L S A
Sbjct: 1162 SFVRDLPRA-ADAEIATAIISIARALGFSVVAEGIEDPRQHDFLKARGCDFGQGHLFSRA 1220

Query: 521  ISPQQVLNY-LHNKLSP 536
            ++ +++L   L   L+P
Sbjct: 1221 VTGERLLRLALSGPLAP 1237