Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  107 bits (266), Expect = 2e-27
 Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 11/295 (3%)

Query: 226 NAAFDIAQPPHWWIADIESWPDVELKLVNPPCEKSALVDHF-PIFGLGNVDETLEIKQLL 284
           +A+  IA  P      +E   D +L L     E SA V  + P      +D  L     +
Sbjct: 306 SASCGIALSPRDAQEPVELIGDADLALHAAKAEASANVALYSPALRTDAMDRRLSS---I 362

Query: 285 NIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPT 344
           +++R +  G F  FYQPQ  +  G ++  EAL R +        P  F P LE   L P 
Sbjct: 363 DLHRAVANGEFLLFYQPQVRLSDGALIGAEALIRWMHPSRGLLSPAAFLPALEGSALAPQ 422

Query: 345 LTEVMVRD-ILTFLMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHAL--H 401
           +   ++ +              D  + VN+       G   R +    EE  A+H L   
Sbjct: 423 VGRWVIEEGCAQAARWRRQGAADFRMAVNLFASQFRAGDLPREV----EESLARHGLPPE 478

Query: 402 RLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGR 461
            L +EITE+ +++D   A   + +L+ +G+R A DDFGTGY+    L   P   +K+D  
Sbjct: 479 ALELEITENIVLSDHSNAIDALARLRQMGVRIAFDDFGTGYASLSLLTRCPVSCIKLDRS 538

Query: 462 YIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYL 516
           ++Q++ +A     ++ +++   ++L M VIAE ++++ +   L E  C   QGYL
Sbjct: 539 FVQAMLQAPREAAVIAAILEMGRALDMDVIAEGIETEAERAYLAERHCPEGQGYL 593