Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 957 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 1e-30
 Identities = 83/244 (34%), Positives = 122/244 (50%), Gaps = 4/244 (1%)

Query: 277 TLEIKQLLNIYRD-LQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPI 335
           TLE  QL N  R  ++ G    FYQP+  + +G + A EAL R    +     P  F  +
Sbjct: 697 TLERLQLENHLRKAIEEGQLTVFYQPKLCLATGKLNAAEALIRWEHPQWGMVPPGDFIGL 756

Query: 336 LEKYHLIPTLTEVMVRDILTFLMT-EDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEK 394
            E+  LI  L E ++R+        +   L  I + VN+    L  G    L+  V EE 
Sbjct: 757 AEETGLIVPLGEFVLREACWQACEWQRQGLAPIRVSVNLSVHQLRQGKLVSLVRQVLEET 816

Query: 395 QAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFD 454
                   L +E+TE  L+   +       +L+ LG++ A+DDFGTGYS   YL  IP D
Sbjct: 817 GLDPQY--LELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVD 874

Query: 455 VVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQG 514
            VKID  +I+ LG+      I +++I+    L+++V+AE V+  QQ   L+   CD VQG
Sbjct: 875 YVKIDQTFIRGLGQGREDAAITRAIIAMAHGLALKVVAEGVEDQQQLDFLRGERCDEVQG 934

Query: 515 YLVS 518
           YL+S
Sbjct: 935 YLIS 938