Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 6e-32
 Identities = 80/255 (31%), Positives = 131/255 (51%), Gaps = 12/255 (4%)

Query: 279 EIKQLLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEK 338
           E++  L  +  L L     FYQP   +  G V   EAL R    +     PDRF  I E 
Sbjct: 468 ELRGALRTHNQLVL-----FYQPIFDMKLGKVTRLEALVRWQHPQHGLLAPDRFIGIAES 522

Query: 339 YHLIPTLTEVMVRDILTFL-MTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQ 397
             LI  L   ++R     L +  D    D+T+ VN     L        L    E+    
Sbjct: 523 NGLIAELDHWVLRQACHDLSLLADRGYTDLTMSVNCSALNLARDE----LADEIEDALRF 578

Query: 398 HAL--HRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDV 455
             +  +RL +E+TE+ L+ +  +    + ++++LG+  A+DDFGTGYS   YL  +P + 
Sbjct: 579 SGIGANRLELEVTENALMGNISSTLALLRQIRALGVSLAIDDFGTGYSSLAYLKRLPLNT 638

Query: 456 VKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGY 515
           +KID  +IQ + K+ +   I+Q++I    +L +QV+ E V++  Q+++L + GCD VQGY
Sbjct: 639 LKIDRSFIQDIPKSTADIEIVQAVIGMAHTLHLQVVTEGVETQAQFEVLLKHGCDFVQGY 698

Query: 516 LVSPAISPQQVLNYL 530
           L+SPA+   +++  +
Sbjct: 699 LLSPAVPASEIIGVM 713