Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Sphingobium sp. HT1-2

 Score =  115 bits (288), Expect = 6e-30
 Identities = 75/236 (31%), Positives = 122/236 (51%), Gaps = 6/236 (2%)

Query: 298 FYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTEVMVRDILTFL 357
           +YQP+  +  G V+ FEAL R V   G   MPD+     E   L   +TE M+  +L   
Sbjct: 517 WYQPKVDLQDGRVIGFEALLRCVRPDGTLMMPDQILAAFEHPELGRKITERMIDQVLADC 576

Query: 358 MTEDAVLQDIT-IGVNIPGKMLTDGSFY-RLLLSVAEEKQAQHALHRLSVEITEHDLIA- 414
               +   D   + VN+PG  L D +F  RLL  +A    A     R+ +E+TE   +  
Sbjct: 577 RAWISAGIDFGHVAVNVPGVELHDRAFPDRLLTRLAH---ADVEPRRIELEVTESVFLGR 633

Query: 415 DFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLGKAESSTV 474
           + D  +  + +L   G+  ALDDFGTGY+   +L + P DV+KID  +++ L        
Sbjct: 634 NVDVVERNLQRLSQAGMAIALDDFGTGYASLSHLKQFPIDVIKIDKGFVRDLETDPDDAA 693

Query: 475 ILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAISPQQVLNYL 530
           I++++++   SL ++ +AE V++ +Q + L+  GC   QGY  S A+   Q+ ++L
Sbjct: 694 IVRTVLNLAYSLGVKTVAEGVETIEQLEYLRSGGCHYGQGYYWSAAVPASQLPSFL 749