Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 2e-28
 Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 9/256 (3%)

Query: 269 FGLGNVDETLEIKQ----LLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALAR-RVIGK 323
           + L +V +  E+K     +  + R L+ G  C +YQP+ ++ +G V+ FE L R +  G+
Sbjct: 286 YHLFDVSQEQELKATHQTVARVRRALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQRPGR 345

Query: 324 GLYEMPDRFFPILEKYHLIPTLTEVMVRDILTFLMTEDAVLQDITIGVNIPGKMLTDGSF 383
           G+   P  F P +E+  LI  + E ++   L+ L       Q  ++ VNI  + L    F
Sbjct: 346 GVVP-PGDFLPWVEQTDLIVEIGEWVIGQALSQLQAWQRQGQPWSLSVNIAARHLQRSDF 404

Query: 384 Y-RLLLSVAEEKQAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGY 442
             RL   +A       AL  L +EI E   I +       +   ++LG+R +LDDFGTGY
Sbjct: 405 AERLQQLLAAYPAVDPAL--LDLEIVESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGY 462

Query: 443 SGYEYLCEIPFDVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQ 502
           S   YL  +P   +KID  +++ +   +    + +++I   ++   +VIAE ++S +  +
Sbjct: 463 SSLSYLKRLPTQTIKIDQSFVRDILHDQDDLALTEAVIGLARAFGREVIAEGLESVEHGR 522

Query: 503 ILQEMGCDLVQGYLVS 518
           +L  +GC+L QGY ++
Sbjct: 523 VLMGLGCELAQGYCIA 538