Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 7e-29
 Identities = 87/258 (33%), Positives = 131/258 (50%), Gaps = 17/258 (6%)

Query: 281 KQLLN-IYRDLQLGHFCAFYQPQKHIDSGGVVAFEALAR-RVIGKGLYEMPDRFFPILEK 338
           +QL N + R L+   F   YQP+  +D   +VA EAL R R   +GL   PD F P+ E+
Sbjct: 604 RQLENDLRRALRNEEFELHYQPRYRLDDLRIVAVEALVRWRHPQEGLLA-PDTFIPLAEQ 662

Query: 339 YHLIPTLTEVMVRDILTFLMTEDAVLQDITIGVNI-PGKMLTD---GSFYRLLLSVAEEK 394
             +I  L   ++R+         A   D+ + VN+ P + L           LL  A   
Sbjct: 663 SDIIVALGRWVLREACRTAHDWPA---DVLVSVNLSPAQFLRSDVVADVRETLLDTAFPA 719

Query: 395 QAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFD 454
           Q      RL +EITE+ ++ D + A   +  LK LG+R  +DDFGTGYS   YL   PFD
Sbjct: 720 Q------RLELEITENVMLNDIEGALGTMLSLKELGVRLNMDDFGTGYSSLGYLRTYPFD 773

Query: 455 VVKIDGRYIQSL-GKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQ 513
            +KID R+I  L     S   ++Q++I+  +++ + V AE V+S+ Q + L++  C  VQ
Sbjct: 774 SIKIDKRFISGLNNNGGSDRAVVQAIINLGEAMGLTVTAEGVESEHQLKSLEKDRCHEVQ 833

Query: 514 GYLVSPAISPQQVLNYLH 531
           GY +S  +    +   LH
Sbjct: 834 GYYLSKPLDSAGLTALLH 851