Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  124 bits (310), Expect = 3e-32
 Identities = 81/243 (33%), Positives = 132/243 (54%), Gaps = 7/243 (2%)

Query: 276  ETLEIKQLLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALAR-RVIGKGLYEMPDRFFP 334
            E LE++   ++   ++   F  +YQPQ   D   +   EAL R R   +GL   P  F P
Sbjct: 1016 ERLELES--DLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVP-PGDFIP 1072

Query: 335  ILEKYHLIPTLTEVMVRDILTFLMT-EDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEE 393
            ++E+  L+  + + ++R+    L     A ++   + VNI  +  +DG     + ++ EE
Sbjct: 1073 VIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEE 1132

Query: 394  KQAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPF 453
                 A   L +E+TE  L+ + + A   +  LK+LG+  A+DDFGTGYS   YL + P 
Sbjct: 1133 SGLPPAC--LELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPI 1190

Query: 454  DVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQ 513
            DV+KID  ++  L + E    I +++I+   SL++ VIAE V++ +Q + L+E GCD VQ
Sbjct: 1191 DVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQ 1250

Query: 514  GYL 516
            GYL
Sbjct: 1251 GYL 1253