Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 893 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  117 bits (294), Expect = 1e-30
 Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 8/246 (3%)

Query: 276 ETLEIKQLLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPI 335
           +TL ++  L   R +  G   A YQPQ  + +G VV  EAL R          P  F P+
Sbjct: 623 KTLSLQTRLR--RAIDQGELIAHYQPQVDLRNGDVVGMEALVRWNSPDLGMVSPADFIPV 680

Query: 336 LEKYHLIPTLTEVMVRDILTF-LMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEK 394
            E+  LI  + E M+ +        +D  L  I + VN+ G+      + R LLS  E  
Sbjct: 681 AEESGLIDGVCEFMLWECTRQNKQWQDEGLPPIPVAVNVSGRQF---QYARRLLSACERA 737

Query: 395 QAQHALHR--LSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIP 452
              + L    L VE+TE   + D D A   + +LK +GI C++DDFGTGYS    L   P
Sbjct: 738 LVDNRLDSRWLEVELTESSAMRDADNAIAVVNQLKEMGIACSIDDFGTGYSSLSVLKRFP 797

Query: 453 FDVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLV 512
              +KID  ++  +    +   I+ ++I+  K+L ++V+AE V+  +    L+ +GCD +
Sbjct: 798 ISKLKIDRSFVLDVTTDPNDAAIVDAIIAMAKALRLKVVAEGVEHQEHLDFLRNLGCDQM 857

Query: 513 QGYLVS 518
           QGY  S
Sbjct: 858 QGYFFS 863