Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  124 bits (312), Expect = 9e-33
 Identities = 69/219 (31%), Positives = 119/219 (54%), Gaps = 2/219 (0%)

Query: 298 FYQPQKHIDSGGVVAFEALARRVIGKGLYEMPDRFFPILEKYHLIPTLTEVMVRDILTFL 357
           F QP   +++G +V  EALAR +  +G +  P+ F P+ EK  LI    E ++      +
Sbjct: 472 FLQPIVDLETGKIVKCEALARWITSEGKFISPEVFIPLAEKSELIFPFGEWLINAACDAI 531

Query: 358 MTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHALHRLSVEITEHDLIADFD 417
               A   DI + +NI G+ ++D +    + +  E+ Q   +   LS+E+TE   +   D
Sbjct: 532 EALKASNLDIRLAINISGRQVSDLALLNQIKNALEDHQIPGS--NLSIELTESVFVESLD 589

Query: 418 AAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLGKAESSTVILQ 477
                + +L+++GI  ++DDFGTG+S   YL ++P D +KID  ++  L K      I+Q
Sbjct: 590 TVSVLLNELRAMGITVSIDDFGTGFSSLVYLKKLPIDELKIDRSFVSELEKNTDDQAIVQ 649

Query: 478 SMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYL 516
           +++    +L++++IAE +++ QQ Q LQ   C   QGYL
Sbjct: 650 AILGLASNLNIKIIAEGIETQQQQQFLQNHRCAYGQGYL 688