Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  116 bits (290), Expect = 3e-30
 Identities = 79/261 (30%), Positives = 133/261 (50%), Gaps = 12/261 (4%)

Query: 277 TLEIKQLLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALAR---RVIGKGLYEMPDRFF 333
           T E+K+ L      Q       YQP+  + +  V + EAL R    V+G   +  PD F 
Sbjct: 510 TTELKRALAS----QQNELSMVYQPKIDLQTMKVCSMEALIRWNNSVLG---FVPPDEFI 562

Query: 334 PILEKYHLIPTLTEVMVRDILTFLMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEE 393
            I E+  LI  +T  +++  ++ L     +    T+ +N+  + + +      L+S+  +
Sbjct: 563 TIAEQAGLIEQVTTWVMKQTISDLAYFRGMGYKFTVAMNLSTQDIQNKVLLGKLVSLLTQ 622

Query: 394 KQAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPF 453
           +        L +EITE DL+AD   A   + +L + G   A+DDFGTGYS   YL  +P 
Sbjct: 623 EGLSP--EALELEITESDLVADASLAIENLNELTARGFHFAIDDFGTGYSSLAYLKNLPV 680

Query: 454 DVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQ 513
             +KID  +I SL   E+   I+ +++S     +++V+AE V+     +IL++ GCD+VQ
Sbjct: 681 KTIKIDKSFILSLASDENDQQIVHTVLSLANVFNLKVVAEGVEDVASLEILKDWGCDIVQ 740

Query: 514 GYLVSPAISPQQVLNYLHNKL 534
           GY +S  +S   + ++L N L
Sbjct: 741 GYYISRPLSRSDLEDWLQNTL 761