Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 814 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  120 bits (300), Expect = 3e-31
 Identities = 88/335 (26%), Positives = 154/335 (45%), Gaps = 23/335 (6%)

Query: 213 KLIDSFQNPAPSDNAAF------DIAQPPHWWIADIESWPDVELKLVNPPCEKSALVDHF 266
           KLI+ F+ P   D   F       IA   H     +E     ++ +     +K A    +
Sbjct: 481 KLIEEFKEPIIVDGVTFYVSISIGIAITNHSRATPVELLRHADIAMYEAKAKKGA---EY 537

Query: 267 PIFGLGNVDETLEIKQLLNIYRD------LQLGHFCAFYQPQKHIDSGGVVAFEALARRV 320
            ++     D T+ +K +  +  +      L+   F    QPQ  + +G +V FEAL R  
Sbjct: 538 RVY-----DATMNLKVMQKVELESEAREALRDNQFSLALQPQLEMHTGRLVGFEALLRWQ 592

Query: 321 IGKGLYEMPDRFFPILEKYHLIPTLTE-VMVRDILTFLMTEDAVLQDITIGVNIPGKMLT 379
             K     P  F P+LE    +  L   V+ R        +++   D+ + +N+      
Sbjct: 593 HPKKGNISPADFIPLLENTSFMLELDYWVITRSTYLIRELKNSGYSDVKMAINLSAGQFL 652

Query: 380 DGSFYRLLLSVAEEKQAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFG 439
           D S    L     +     A  ++ +E+TE  L++D   A   +  ++ +G   A+DDFG
Sbjct: 653 DPSLPEFLQQQIIKNDI--APDQVCLELTETVLVSDIKRATTIMQNIRDMGCMLAIDDFG 710

Query: 440 TGYSGYEYLCEIPFDVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQ 499
           TGYS   YL  +P D +KID  ++ ++  +     I+ S IS ++++ MQV+AE +++ +
Sbjct: 711 TGYSSLSYLKSLPADYIKIDRSFVANIASSADDRNIVHSTISMVRNMGMQVVAEGIETSE 770

Query: 500 QYQILQEMGCDLVQGYLVSPAISPQQVLNYLHNKL 534
           QY++L    C+L QGYL+S  I    + + L +K+
Sbjct: 771 QYELLCHFDCNLGQGYLISRPIPEVNIWDVLSDKV 805