Pairwise Alignments

Query, 536 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  114 bits (284), Expect = 2e-29
 Identities = 83/245 (33%), Positives = 119/245 (48%), Gaps = 7/245 (2%)

Query: 273 NVDETLEIKQLLNIYRDLQLGH--FCAFYQPQKHIDSGGVVAFEALARRVIGKGLYEMPD 330
           ++DE    +  L I     L +  F  +YQ Q    SG +V FEAL R    +     P 
Sbjct: 416 SMDEAARARNALAIAMRSGLANNEFELYYQQQNDTKSGSIVGFEALLRWKHPERGMVSPV 475

Query: 331 RFFPILEKYHLIPTLTEVMVRDILTFLMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSV 390
            F PI E+   I  L E ++R+            + + I VN+  + L D  F   +  +
Sbjct: 476 EFIPIAEQTGFIVELGEWVLREACAQAARWK---KSLAIAVNVAPQQLADNDFPDKVERI 532

Query: 391 AEEKQAQHALHRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCE 450
             E     A  RL +EITE  +IAD   A   I KLKSLG++ A+DD+GTGYS    L  
Sbjct: 533 LAETGL--APERLELEITEGSIIADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLSTLQS 590

Query: 451 IPFDVVKIDGRYIQSLGKAESSTVILQSMISSIKSLSMQVIAEWVDSDQQYQILQEMGCD 510
            PFD +KID  +I  L     S  I++S +    SL++ V+AE V++    + L+  GC 
Sbjct: 591 FPFDKIKIDRAFIDGLSTNVQSEAIVRSTLILAHSLNIPVLAEGVETKAHIEFLRREGCL 650

Query: 511 LVQGY 515
            VQG+
Sbjct: 651 QVQGF 655