Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 87/339 (25%), Positives = 163/339 (48%), Gaps = 47/339 (13%)

Query: 107 WREHYAHCFPDCQSALAAKFHTAENHYLLLIMQPMLDGFNHSQRDELYALFDVTK----- 161
           WR+   HC      A A +  +A N  L+ ++  + D    +++D L  + ++ +     
Sbjct: 231 WRDGSTHCVEI--RARAVRDRSAANPRLVGVLSDVTD--RKARQDALTRMNEILEERVAA 286

Query: 162 ---------SALYSMLQFRKTVIDKHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFS 212
                    +A+ + ++ RK    + Q++Q +K+ ++G+L   VAH+ NN L  V+ N  
Sbjct: 287 RTAELTASHAAVLAEMEQRKRA--EEQLRQVQKMETIGQLTGNVAHDFNNLLTAVIGNLE 344

Query: 213 FLNEYVAQIRQHPQIQPIADPRLHEMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHEN 272
            L + VA            DPR   ++  +        +G  R   +   L  ++   + 
Sbjct: 345 LLRKRVAN-----------DPRAVRLVDGA-------CQGAQRGAALTQRLLAFARRQDL 386

Query: 273 MAEI-DMRDVLSSALALIIGDLKYRAQF-VYPAPEKPYYIRGSYNKLQQVFINLIINAVQ 330
             E   + D++S A+ LI   +  R +  ++ + + P  +  + N+++   +NL++NA  
Sbjct: 387 KVEPRSLTDLVSGAVDLIERSIGSRIELRLHLSQDSPPALVDA-NQIELALLNLVVNARD 445

Query: 331 SVSATQEGVVRLELCEVRW-PGEGIPR---VQVLIEDNGKGISAEHLEKVFDPFFTTKKV 386
           ++     GVV + +   +  PG G+P    V++ + D G G+ AE LEK  +PFF+TK+ 
Sbjct: 446 AMP--NGGVVSISVDHPQAAPGAGLPEGPYVRLTVSDTGYGMDAETLEKATEPFFSTKEQ 503

Query: 387 GDGAGLGLSVAREIIEEHHGKIKLCSTEGVGTRVFVTLP 425
           G G GLGLS+   +  + +G ++L S  G GTR  + LP
Sbjct: 504 GKGTGLGLSMVHGLAVQLNGALRLSSEVGAGTRAELWLP 542