Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas simiae WCS417

 Score =  112 bits (279), Expect = 4e-29
 Identities = 88/287 (30%), Positives = 143/287 (49%), Gaps = 31/287 (10%)

Query: 148 SQRDELYALFDVTKSALYSMLQFRKTVIDKHQ--VQQEEKLASLGKLAAGVAHEINNPLG 205
           +QR  L  L   ++  L  +++ R   +   Q  + Q  KLA+LG+++A +AHEIN PL 
Sbjct: 321 TQRWRLARLRQRSREELEQLVEERTQALRTAQDGLVQSAKLAALGQMSAALAHEINQPL- 379

Query: 206 FVMSNFSFLNEYVAQIRQHPQIQPIADPRLHEMIADSEAILMESLEGLSRIKNIVSSLNV 265
                        AQ  Q   ++ + D   H  + D+   L    + L+R+  +   L  
Sbjct: 380 ------------TAQRMQLATLRLLLD---HGRVDDAYQALTPLDDMLTRMAALTGHLKT 424

Query: 266 YSHTHEN--MAEIDMRDVLSSALALIIGDLKYRAQFVYPAPEKPYYIRGSYNKLQQVFIN 323
           ++    +     +D+  V+  +L L+   L+  +  V     +P ++RG   +L+QV IN
Sbjct: 425 FARKSPSGLRERLDLATVVDQSLHLLDARLRDESIGVVLDLTRPAWVRGDAIRLEQVLIN 484

Query: 324 LIINAVQSV--SATQEGVVRLELCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFF 381
           L+ NA+ ++     +   +RL   E  W        Q+ + D+G GI+ EHL  VFDPFF
Sbjct: 485 LLRNALDAMVDKPRKRLEIRLHADEQLW--------QLTVSDSGGGIAEEHLNSVFDPFF 536

Query: 382 TTKKVGDGAGLGLSVAREIIEEHHGKIKLCSTEGVGTRVFVTLPQAV 428
           TTK VGDG GLGL+V+  I+ E  G++ + S  G G    +TLP A+
Sbjct: 537 TTKPVGDGLGLGLAVSYAIVHELGGRL-IASNRGDGAVFTLTLPIAL 582