Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  107 bits (267), Expect = 1e-27
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 29/267 (10%)

Query: 182 QEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVA----QIRQHPQIQPIADPRLHE 237
           Q EK+ S+G LAAG+AHEINNPLG ++ N   +   ++    +  +H Q   I    ++ 
Sbjct: 406 QSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNLEHAQQAGIELETVNR 465

Query: 238 MIADSEAI-LMESLE--GLSRIKNIVSSLNVYSHTHENMAEIDMRDVLSSALALIIGDLK 294
            +   E   L++ ++  G    K +   L+    ++  MA  D+  ++  A+ +   D  
Sbjct: 466 YLQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRSNRQMAPCDLPALIDQAVEIAGNDFD 525

Query: 295 YRAQFVYPAPE-----KPYY--IRGSYNKLQQVFINLIINAVQSVSATQEG------VVR 341
               F +          P    + G+ N+L+QV +NL+ NA Q++   ++       ++R
Sbjct: 526 LAIGFDFKGQAIIRQFDPQLGPVPGTANELEQVLLNLLKNAAQAIHLREDDSEPGRIILR 585

Query: 342 LELCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREII 401
             L          P  ++ +EDNG G+S    ++ F+PFFTTK++G G GLGLSV+  II
Sbjct: 586 TRL--------NPPWAEIQVEDNGIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFII 637

Query: 402 EEHH-GKIKLCSTEGVGTRVFVTLPQA 427
             +H G++++ ST G GT   + LP A
Sbjct: 638 TNNHKGQMEVHSTLGQGTCFTLRLPLA 664