Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  106 bits (265), Expect = 2e-27
 Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 16/284 (5%)

Query: 151 DELYALFDVTKSALYSMLQFRKTVIDKHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSN 210
           DEL    +  ++AL  + Q ++++I      Q EK+ASLG L AGVAHEIN P+G  ++ 
Sbjct: 489 DELLRAKNAAEAALSDLQQAQQSLI------QAEKMASLGGLVAGVAHEINTPVGIGLTG 542

Query: 211 FSFLNEYVAQIRQHPQIQPIADPRLHEMIADSEAILMESLEGLSRIKNIVSSLN--VYSH 268
            S L     ++R+    Q + +    + +  +       L  ++R   ++ S        
Sbjct: 543 ASTLASETERLRKLYGEQAMTEEDFLDYLGVAAETARLLLANMNRAAELIHSFKQVAVDQ 602

Query: 269 THENMAEIDMRDVLSSALALIIGDLKYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINA 328
           T       D++  +   L  +   +K R   V  +      +      L QV  NL++NA
Sbjct: 603 TSAERRRFDLKTYIEEILNSLTPTIKKRRLGVEVSCPDGIEMNSYPGILSQVLTNLVMNA 662

Query: 329 V-QSVSATQEGVVRLELCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVG 387
           V  +    Q G++ + + ++         V +   D+GKGISAE+L ++FDPFFTT++  
Sbjct: 663 VVHAYEENQAGILGIRVQDLG------DEVLLAFSDDGKGISAENLSRIFDPFFTTRRGN 716

Query: 388 DGAGLGLSVAREIIE-EHHGKIKLCSTEGVGTRVFVTLPQAVRA 430
            G+GLGL +   ++    +G+I + S  G GT   +  P+ VR+
Sbjct: 717 GGSGLGLHIVFNVVTGSLNGQIDVASEPGRGTTFTLRFPKTVRS 760