Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Sensor protein of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  124 bits (311), Expect = 6e-33
 Identities = 84/253 (33%), Positives = 138/253 (54%), Gaps = 27/253 (10%)

Query: 180 VQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQHPQIQPIADPRLHEMI 239
           ++++EKL ++G LAAGVAHEI NPL    S+   L +Y A+       +  A    HE+ 
Sbjct: 238 MKRKEKLVAMGHLAAGVAHEIRNPL----SSIKGLAKYFAE-------RTPAGGESHELA 286

Query: 240 ADSEAILMESLEGLSRIKNIVSSLNVYSHTHENMAEIDMRDVLSSALALIIGDLKYRA-Q 298
                ++ +  + L+R+  +   L +    H  +  +++ D+++ +L L+  D + R  Q
Sbjct: 287 Q----VMAKEADRLNRV--VSELLELVKPAHLTLQTVNLNDIITHSLNLVSQDAQSREIQ 340

Query: 299 FVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEGVVRLELCEVRWPGEGIPRVQ 358
             + A E    I+   ++L QV +NL +NA+ ++   ++G + +E  E      G  RV 
Sbjct: 341 LRFTANETLKRIQADPDRLTQVLLNLYLNAIHAIG--RQGTISVEAKE-----SGTDRVI 393

Query: 359 VLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREIIEEHHGKIKLCSTEGVGT 418
           + + D+GKGI+ + LE +F P+FTTK   DG GLGL+V + IIE+H G IK+ S EG G 
Sbjct: 394 ITVTDSGKGIAPDQLEAIFTPYFTTK--ADGTGLGLAVVQNIIEQHGGAIKVKSIEGKGA 451

Query: 419 RVFVTLPQAVRAQ 431
              + LP   R Q
Sbjct: 452 VFTIWLPVIARQQ 464