Pairwise Alignments

Query, 434 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., sensory histidine kinase in two-component regulatory system with AtoC (NCBI) from Escherichia coli BW25113

 Score =  111 bits (278), Expect = 5e-29
 Identities = 80/263 (30%), Positives = 135/263 (51%), Gaps = 30/263 (11%)

Query: 164 LYSMLQFRKTVIDKHQVQQEEKLASLGKLAAGVAHEINNPLGFVMSNFSFLNEYVAQIRQ 223
           ++S L  RK    + ++ Q E+LA+LG+L AGVAHE+ NPL       + +  YV  +RQ
Sbjct: 366 IFSDLTARKET--QRRMAQAERLATLGELMAGVAHEVRNPL-------TAIRGYVQILRQ 416

Query: 224 HPQIQPIADPRLHEMIADSEAILMESLEGLSRIKNIVSSLNVYSHTHENMAEIDMRDVLS 283
                  +DP   E ++    ++++ ++ ++++  I   L      H    ++ +  ++ 
Sbjct: 417 QT-----SDPIHQEYLS----VVLKEIDSINKV--IQQLLEFSRPRHSQWQQVSLNALVE 465

Query: 284 SALALI-IGDLKYRAQFVYPAPEKPYYIRGSYNKLQQVFINLIINAVQSVSATQEGVVRL 342
             L L+    ++ R  F+     +   I      L+QV +N++INAVQ++SA   G +R+
Sbjct: 466 ETLVLVQTAGVQARVDFISELDNELSPINADRELLKQVLLNILINAVQAISA--RGKIRI 523

Query: 343 ELCEVRWPGEGIPRVQVLIEDNGKGISAEHLEKVFDPFFTTKKVGDGAGLGLSVAREIIE 402
           +  +     + I      IEDNG GI     +K+FDPFFTTK    G GLGL++++ II 
Sbjct: 524 QTWQYSDSQQAIS-----IEDNGCGIDLSLQKKIFDPFFTTK--ASGTGLGLALSQRIIN 576

Query: 403 EHHGKIKLCSTEGVGTRVFVTLP 425
            H G I++ S  G G    + LP
Sbjct: 577 AHQGDIRVASLPGYGATFTLILP 599