Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 905 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  149 bits (375), Expect = 5e-40
 Identities = 117/460 (25%), Positives = 198/460 (43%), Gaps = 78/460 (16%)

Query: 1   MAKSRLLLSELLDQLSFALCIVRNDYVIVKVNEYFESRVIFDGETMQGKNILELFPESAD 60
           +AKS   L  + D L   +  V  D+V    N ++E  V      + G+++ ++  E   
Sbjct: 211 LAKSESELRIITDSLPVLISYVDADHVYRFANSFYEDWVGKPPSEVIGRHVRDVVGE--- 267

Query: 61  YLKRKIDTALVIESSSFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEH 120
             K  +    +IE +    W      +P +S    + E       +  IP    DG++  
Sbjct: 268 --KTYVARLPLIERAMAGEWVVADTTMPHRSGEDRAAE-------VRYIPRIEADGSVAG 318

Query: 121 VCLCVYDVTIQASQQQELKRVSQKLEEEHQSQKVLIKKLE-----------DAQGQLIQS 169
             + V+D+  +  ++  L+R  Q  E   +  + L + LE            A+  L QS
Sbjct: 319 FHVLVFDIEDRVRREAALERQVQHRERAEEQLRHLNETLETRVVEEMAERRQAEAILAQS 378

Query: 170 EKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTALNEA 229
           +KM +IGQL+ G+AH+ NN +  ++ NLQ L+                    +D A NE 
Sbjct: 379 QKMETIGQLTGGVAHDFNNLLQVVSGNLQLLA--------------------RDIAGNEK 418

Query: 230 CQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRSEWSYANLENCIES 289
            +                  +  ++ G +R   +   L  F      E    N+   +  
Sbjct: 419 AET----------------RVANAMAGVTRGAKLAAQLLAFGRRQALEPKVVNVTRFVRD 462

Query: 290 TLKIINNEIKYNITLEKHYAANVPDVFCQPMQINQVLLNILVNASHAIKGEGTITITLQS 349
              ++   I   I +E      + + F  P Q+   LLN+ +NA  A++G+G +TI L +
Sbjct: 463 MDDMLRRAIGEGIEVETIVGGGLWNTFVDPAQVENALLNLAINARDAMEGQGKLTIELGN 522

Query: 350 AGDD--------------FVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGTGLGLSVS 395
           A  D              +V + + DTG GIP EI E++F+PFF+TK  G G+GLGLS+ 
Sbjct: 523 ASLDDEYARSHSEVAPGQYVMLAVTDTGSGIPPEIIEKVFDPFFSTKSEGKGSGLGLSMV 582

Query: 396 YGIINKHNGTISVTSEVGKGSEFTIRLPVNPSAEAVDNTD 435
           YG + +  G + + SEVG+G+   +  P      +V+N D
Sbjct: 583 YGFVKQSGGHVKIYSEVGEGTTIKLYFP-----RSVENED 617



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 18/64 (28%), Positives = 30/64 (46%)

Query: 97  GEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQQQELKRVSQKLEEEHQSQKVLI 156
           G  E++  +L   PI+ EDG +  V   V + T +   Q+ L +   +L     S  VLI
Sbjct: 170 GTPEEVIFDLFYTPIYDEDGKVGGVMCTVIENTEKVEAQRALAKSESELRIITDSLPVLI 229

Query: 157 KKLE 160
             ++
Sbjct: 230 SYVD 233