Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1022 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  190 bits (482), Expect = 2e-52
 Identities = 107/285 (37%), Positives = 174/285 (61%), Gaps = 21/285 (7%)

Query: 156  IKKLEDAQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSIT 215
            I+ L+ AQ + +Q+ ++AS+GQL+AGIAHEIN P+ ++  NL+ +SD   SL K++ ++T
Sbjct: 735  IEALKRAQREALQASRLASVGQLAAGIAHEINTPIQYVGDNLRFISD---SLIKLMSALT 791

Query: 216  QT------IGQSKDTALNEACQKI---LKQGQVDFILEDTAELITESLEGSSRVMSIVKN 266
                    +GQ    AL EA  K     +  ++ F++ +    ++ESL+G +++  IV +
Sbjct: 792  AARELGSEVGQIP--ALAEAAAKFEAAFRTTKIPFLVAEIPAALSESLDGVAQIARIVLS 849

Query: 267  LKEFSHVDRSEWSYANLENCIESTLKIINNEIKYNITLEKHYAANVPDVFCQPMQINQVL 326
            +KEFSH   S     ++   ++STL +  N  K++  +E+++   +P V C   ++NQV 
Sbjct: 850  MKEFSHPGTSSKIMTDINRALDSTLTVSRNVWKHSAEVERNFDPTLPPVLCHAGELNQVF 909

Query: 327  LNILVNASHAIKGE-----GTITITLQSAGDDFVEIHIRDTGCGIPEEIRERIFEPFFTT 381
            LN++VNA+HAI+       G ITI+    G   V I + D+G G+PE IRERIF+PFFTT
Sbjct: 910  LNLIVNAAHAIESSGKPLPGRITISTGRDGGHVV-ITVADSGTGVPEAIRERIFDPFFTT 968

Query: 382  KPVGSGTGLGLSVSYGII-NKHNGTISVTSEVGKGSEFTIRLPVN 425
            K VG GTG GL++   ++  KH G++ +    G G+ F +RLP++
Sbjct: 969  KEVGKGTGQGLAICRDVVMTKHGGSLDLGDNAGDGAVFVVRLPID 1013