Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  162 bits (409), Expect = 3e-44
 Identities = 100/270 (37%), Positives = 153/270 (56%), Gaps = 17/270 (6%)

Query: 159 LEDAQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTI 218
           L+ AQ QLIQ EKMAS+G+L AG+AHE+NNP+ F+  N+  LS Y   +   L +I    
Sbjct: 183 LKTAQAQLIQQEKMASLGRLIAGVAHELNNPISFVYGNVHALSKYSTRIAAYLDAIHAGC 242

Query: 219 GQSKDTALNEACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRSEW 278
            +++  AL  + +       +D  L D   L+  + EG+ RV  IV++LK  S    S+ 
Sbjct: 243 DETEREALRASLR-------IDSTLADLPALMEGTAEGAQRVADIVRSLKRLSFSAGSKP 295

Query: 279 SYANLENCIESTLKIINNEIKYNITLEKHYAANVPD---VFCQPMQINQVLLNILVNASH 335
              +L   +   ++   +  K   ++E     ++PD   V   P Q++QV++N++ NA  
Sbjct: 296 EEFDLGEVVAKAVQWSGSGKKGLASIE----LDLPDHLAVRGNPGQLHQVIVNLIENALD 351

Query: 336 AIKG--EGTITITLQSAGDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGTGLGLS 393
           A+ G  +G + +T ++ G   V + I D G GIP +I  ++F+PFFTTKPVG GTGLGL 
Sbjct: 352 AVAGRPDGRVEVTGKAEGGQTV-LTIADNGPGIPPDIVGKVFDPFFTTKPVGKGTGLGLW 410

Query: 394 VSYGIINKHNGTISVTSEVGKGSEFTIRLP 423
           +SYGII  H G++   +    G+ FTI LP
Sbjct: 411 ISYGIIRDHGGSLEAGATASGGARFTISLP 440