Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 796 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  121 bits (304), Expect = 7e-32
 Identities = 91/284 (32%), Positives = 137/284 (48%), Gaps = 57/284 (20%)

Query: 165 QLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDT 224
           Q  QS+KM ++GQL+ G+AH+ NN +                                 T
Sbjct: 413 QFAQSQKMQAMGQLAGGVAHDFNNLL---------------------------------T 439

Query: 225 ALNEACQKILKQ-GQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRSEWSYANL 283
           A+   C  +L++ G  D    D    I +  + ++R  S+V+ L  FS     +    N+
Sbjct: 440 AMIGFCDLLLQRHGAGDPSFAD----IMQVKQNANRAASLVRQLLAFSRRQALQPRLLNV 495

Query: 284 ENCIESTLKIINNEIKYNITLEKHYAANVPDVFCQPMQINQVLLNILVNASHAIKGEGTI 343
            + +     ++   +   I L   +   +  V   P Q +QV++N+ VNA  A+ G G +
Sbjct: 496 TDALAELSNLLRRLLGETIELRMIHGRALGLVRVDPGQFDQVIINLAVNARDAMPGGGAL 555

Query: 344 TIT---------------LQSAGDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGT 388
           TI                L  AGD +V+I + DTG GI +E   RIFEPFF+TK VG+GT
Sbjct: 556 TIRTNAVHVDQPIQRGPELMPAGD-YVQIEVADTGTGIGKENLARIFEPFFSTKEVGAGT 614

Query: 389 GLGLSVSYGIINKHNGTISVTSEVGKGSEFTIRLP---VNPSAE 429
           GLGLS  YGI+ + +G I V SE G+G+ F+I LP    +P+AE
Sbjct: 615 GLGLSTVYGIVRQTDGFIFVESEPGQGATFSIYLPRIDADPAAE 658