Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1079 a.a., PAS domain S-box protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  117 bits (292), Expect = 2e-30
 Identities = 95/336 (28%), Positives = 155/336 (46%), Gaps = 60/336 (17%)

Query: 107 EVIPIHSEDGTIEHVCLCVYDVTIQASQQQELKRVSQKLEEEHQSQKVLIKKLEDAQGQL 166
           E +P     G  +       DVT     + +LKR+++ LEE  +  + LI+K + A+ QL
Sbjct: 640 EGVPRFDASGLFQGYVGACLDVTDAKRAEDDLKRINELLEE--RVDEALIEKAQ-AEAQL 696

Query: 167 IQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTAL 226
           + +++M ++G+L+ G+AH+ NN           L+    +L+ +L+S             
Sbjct: 697 VHAQRMEAVGRLTGGVAHDFNN----------LLTVVIGALDIILRS------------- 733

Query: 227 NEACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRSEWSYANLENC 286
            E   K  K G+         E +T  L   SR  ++     + + + R           
Sbjct: 734 -EDAAKRKKLGEAALAAARRGESLTHQLLAFSRRQALRPEPIDLNALIRESEPLLR---- 788

Query: 287 IESTLKIINNEIKYNITLEKHYA-ANVPDVFCQPMQINQVLLNILVNASHAI------KG 339
                + +   + + + L++  A ANV      P Q    LLN++VNA  A+      KG
Sbjct: 789 -----RAVGEAVDFKVKLKRGGAPANV-----DPAQFEAALLNLIVNARDALGDVTGAKG 838

Query: 340 -EGTITITLQS-----------AGDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSG 387
            +  IT+  ++           A  D+V + + D G G+  +IR+R+FEPFFTTK VG G
Sbjct: 839 RQARITVQTRACTVEAGQIAELAAGDYVCVSVADNGEGMSPDIRDRVFEPFFTTKGVGKG 898

Query: 388 TGLGLSVSYGIINKHNGTISVTSEVGKGSEFTIRLP 423
           TGLGLS  YG   +  G + + SE G+G+E  I LP
Sbjct: 899 TGLGLSQVYGFARQSGGGVQIISEPGRGAEICIFLP 934