Pairwise Alignments

Query, 121 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 1e-12
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%)

Query: 1   MAIRLTVADDSKMSR---KSVIRAIPAGWDVEITEAQNGKEAVENYNNGLADVMFLDLTM 57
           M  RL + DD  + R   ++++  IP G+DV + EA +G + ++       D++ LD++M
Sbjct: 1   MTCRLLLVDDHSLIRAGVRALVCDIP-GYDV-VGEADDGNQLLDQVRTLAPDIILLDISM 58

Query: 58  PEMDGIQVLEHFHRIDAKCLVIVISADIQPLVQQRVRELGALNFLQKPLDPAQLEQTL 115
               G+  L       + C V+++S    P +  R  E GA  +L K     +LEQ L
Sbjct: 59  RSTSGLDALTQLRASGSTCKVLILSMHTDPDLIMRALESGAHGYLLKDTSATELEQAL 116