Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 21/232 (9%)

Query: 133 RKRLGALEEIPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKIIQIANSSYFGFR 192
           ++RL A  EIP L ++ +K+ ++   PN ++D I   +  +P L A+++  A S Y+   
Sbjct: 185 QQRLEATIEIPPLADTAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPYYASP 244

Query: 193 RNTDSLHEAVAR-LGAVLVESIAISLLAIHPSNVNSAEDHQWVADCAFKSSSIARALVRE 251
               S+ +A+ R LG  LV ++A+ L       ++  +DH   +   +  S    A++  
Sbjct: 245 GKIRSVEDAIVRVLGFDLVINLALGLAL--GKTLSLPKDHPHQSTPYWHQSIYTAAVIEG 302

Query: 252 L--GFPRQDQDR---IFVANLLTSIGKILLLEDGASKKEFLDYY-----HLQPGYAD--- 298
           L    PR  +      ++A LL + G +LL          +  +     HL   Y +   
Sbjct: 303 LTRAMPRAQRPEAGLTYLAGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQHL 362

Query: 299 ----CDVISAYILIMWGYDIDIGDIILNQRLTSFSGEHLEQLGSLSCLANRI 346
                + I A+++  W    ++   +  Q   ++ G++ E   +L CLA R+
Sbjct: 363 LGISREQIGAWLMRYWDMPDELSTALRFQHDPTYDGQYAE-YPNLVCLAVRL 413