Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 5   AMKVVCVDDDDFMLKALGRMIRRMRPDWE-IELVEDANHWVVDVEHAPSVVISDLLMPGK 63
           A+KV+ V+DD  + +ALG  +      ++ +   E+A   V+  E A S+V+SD+ MPG 
Sbjct: 2   AIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVL--EDAFSLVVSDVNMPGM 59

Query: 64  NGEALLTELRARCPETMRVLLTGDTTQELPRKA-HTYAQFVLPKPF 108
           +G  LL++LR + P+   +L+T     E   +A    A   L KPF
Sbjct: 60  DGHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPF 105