Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 25/234 (10%)

Query: 133 RKRLGALEEIPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKIIQIANSSYFGFR 192
           ++RL A  EIP L ++ +K+ ++   PN ++D I   +  +P L A+++  A S Y+   
Sbjct: 185 QQRLEATIEIPPLADTAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPYYASP 244

Query: 193 RNTDSLHEAVAR-LGAVLVESIAISL-----LAIHPSNVNSAED--HQWVADCAFKSSSI 244
               S+ +A+ R LG  LV ++A+ L     L++   N + A    HQ +   A     +
Sbjct: 245 GKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDNPHQATPYWHQSIYTAAV-IEGL 303

Query: 245 ARALVRELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYY-----HLQPGYAD- 298
            RA+ R     R +    ++A LL + G +LL          +  +     HL   Y + 
Sbjct: 304 TRAMPRA---QRPEAGLTYLAGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQ 360

Query: 299 ------CDVISAYILIMWGYDIDIGDIILNQRLTSFSGEHLEQLGSLSCLANRI 346
                  + I A+++  W    ++   +  Q   ++ G++ E   +L CLA R+
Sbjct: 361 HLLGISREQIGAWLMRYWDMPDELSTALRFQHDPTYDGQYAE-YPNLVCLAVRL 413