Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., HDOD domain protein from Alteromonas macleodii MIT1002

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 27/210 (12%)

Query: 142 IPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKIIQIANSSYFGFRRNTDSLHEA 201
           +P LP    K+++    P+ +++A+ + I  +P L A++I+IANS+Y G      S+ +A
Sbjct: 22  LPTLPAIALKVRKAADDPDINLNAMGDVIGQDPSLSARMIKIANSAYMGRSVKVTSISQA 81

Query: 202 VARLGAVLVESIAISL----LAIHPSNVNSAE-DHQWVADCAFKSSS-------IARALV 249
           V R+G   +++I+ +L    L +  ++V +     +W       ++S       IAR   
Sbjct: 82  VTRIGLRQIKNISTALAMEQLFVSKNDVVARYLQQEWANTVNIVANSMAVLQLYIARTKK 141

Query: 250 RELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCDV------IS 303
           RE+       D + +A L+ +IG + +L +     E        P + +  +      I 
Sbjct: 142 REM-----SMDTMTLAALVHNIGVLPILTEAERHPEVF----ANPSFLEVAIDKLAGRIG 192

Query: 304 AYILIMWGYDIDIGDIILNQRLTSFSGEHL 333
           A I+  WG+     ++  N +  S+  E L
Sbjct: 193 ASIMTEWGFGETFVNVSKNWKDLSYMPEEL 222