Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 75.1 bits (183), Expect = 7e-18
 Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 23/162 (14%)

Query: 529 LHGISHTDNLTKLRNRRALYNRYRRGLSP------RLSLVYLDVNTFKSINDQYGHEVGD 582
           L  ++  D LT+L NR  L +R R  L+        ++L+Y+D++ FK +ND +GH VGD
Sbjct: 285 LKRMAQYDQLTQLPNRELLRDRLRAALAHARTVHGHMALLYVDLDRFKQVNDTHGHAVGD 344

Query: 583 KVLKQLAQRIEAVWRGRS--YRIGGDEFILI---------GECSAKRLEHVVAQCERFMF 631
            +L+ +A R++   R      RIGGDEF+++          +  A ++  V+AQ  R   
Sbjct: 345 MLLQTVANRLKGCVRETDTVARIGGDEFVVLLHSVHAAEDADSVAGKIRQVLAQPMRLDG 404

Query: 632 VDAERDVSFEVSVAIGIAKNRERTESLNEVMHQADIAMYRAK 673
            D        +  +IG+A+  E  E   ++   AD AMY AK
Sbjct: 405 HD------LRIEPSIGVARFPEHGEEEQQLFRHADQAMYAAK 440