Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 81.3 bits (199), Expect = 1e-19
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 15/155 (9%)

Query: 532 ISHTDNLTKLRNRRALYNRYRRGLSP------RLSLVYLDVNTFKSINDQYGHEVGDKVL 585
           ++H D LT L NR  L +R    L+       R++++Y+D++ FK IND  GHE GD VL
Sbjct: 279 LAHHDTLTGLPNRNLLNDRISHALARVRRHGGRMAVLYVDLDKFKPINDTLGHEAGDAVL 338

Query: 586 KQLAQRIEAVWRGRS--YRIGGDEFILIGECSAKRLEHVVAQCERFMFVDAERDVSFE-- 641
           K++A+R++   R      R+GGDEF+++ E   +  E   A   R +       V +E  
Sbjct: 339 KEVARRLDNCVRSSDTVSRVGGDEFVVVVEEIGRPGE--AAMVARKIIEALGTPVPYEDH 396

Query: 642 ---VSVAIGIAKNRERTESLNEVMHQADIAMYRAK 673
              V  +IGIA   +   ++ EV   AD+AMYR K
Sbjct: 397 SCLVGASIGIAVFPDDGNTMEEVSKAADVAMYRVK 431