Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 11/171 (6%)

Query: 515 FAMAFIVLFMVAFY----LHGISHTDNLTKLRNRRALYNRYRRGLSPRLSLVYLDVNTFK 570
           FA++  V+ +VA      L  +++TD LT ++NRR  +        P  + + LD++ FK
Sbjct: 199 FAISLFVMMLVAERSERKLLVLANTDPLTGVKNRRFFFQTMPAAPDPADAAMLLDIDHFK 258

Query: 571 SINDQYGHEVGDKVLKQLAQRIEAVWRGRSY--RIGGDEFILI----GECSAKRLEHVVA 624
           SIND++GH VGD VL+++A+RI    RG     R GG+EFI+     G   A  +   + 
Sbjct: 259 SINDRFGHAVGDSVLQEVARRISGSIRGGDVLARYGGEEFIIFLPGAGVDKACMIGERIR 318

Query: 625 QCERFMFVDAERDVSFEVSVAIGIAKNRERTESLNEVMHQADIAMYRAKAE 675
                  VD    +   V+++IG+A   +    L  +  +AD A+YRAK E
Sbjct: 319 DAVAINEVDC-GGLRVGVTISIGVATTGDMRCDLQMLAEKADRALYRAKTE 368