Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., putative inner membrane peptidase from Pseudomonas putida KT2440

 Score =  338 bits (867), Expect = 1e-97
 Identities = 179/351 (50%), Positives = 244/351 (69%), Gaps = 15/351 (4%)

Query: 1   MEFLLDYGLFLAKIVTVVVALVAVLVIVKSLGGRSGGAKG-ELEITDLTEQHKETVERLE 59
           MEFL +Y  FLAK  T+V+A++ VL  +  L G+     G +L++T L + +K+  ERLE
Sbjct: 1   MEFLAEYASFLAKTATLVIAILVVLSAIAGLRGKGRRKSGGQLQVTRLNDFYKDLRERLE 60

Query: 60  AYLHDEAFLKARDKADKKKEKAEQKSREKSLKQAAKEGELESKRDPHLFVLDFHGSIDAK 119
           + L D+A LKA  K   K EK ++K            G+ E K    +FVLDF G I A 
Sbjct: 61  SGLLDKAQLKALRKQQAKAEKQQKK------------GKAEDKS--RVFVLDFDGDIKAS 106

Query: 120 EVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDKV 179
              SLR E++A+L +A A DEV+LRLE+GGG+VH YGLA+SQL R++ AG+PLT+ +DKV
Sbjct: 107 ATESLRNEITALLTLATARDEVVLRLESGGGLVHSYGLAASQLARIRQAGIPLTVCIDKV 166

Query: 180 AASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTM 239
           AASGGYMMACI +KIVSAPFA++GSIGVVAQLPN ++LLKK+DI+FE LTAGEYKRTLT+
Sbjct: 167 AASGGYMMACIGEKIVSAPFAVLGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTLTV 226

Query: 240 FGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDEIQ 299
           FGENT+K REK++++L+ THQLFKDF+  +RP L +D+VATGE W G  A    LVDE+Q
Sbjct: 227 FGENTEKGREKYQEDLDITHQLFKDFVSRYRPQLHIDEVATGEVWLGVAALNRKLVDELQ 286

Query: 300 TSDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAGDAADNVLLKLISRGQR 350
           TSD+ +    ++  +  L Y ++K L +++   A    +N ++ L S+  R
Sbjct: 287 TSDEYLSERARNANLFHLHYAERKSLQERIGMAASGTVENAVVGLWSKLSR 337