Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., putative protease SohB from Pseudomonas lactucae CFBP13502

 Score =  342 bits (876), Expect = 1e-98
 Identities = 183/350 (52%), Positives = 245/350 (70%), Gaps = 18/350 (5%)

Query: 1   MEFLLDYGLFLAKIVTVVVALVAVLVIVKSLGGRSGGAK---GELEITDLTEQHKETVER 57
           M+FL +Y  FLAK VT+V+A++ VL+   +L  RS G +   G+L+++ L + +K   ER
Sbjct: 1   MDFLAEYASFLAKTVTLVIAILVVLISFAAL--RSKGRRKSAGQLQVSKLNDFYKGLRER 58

Query: 58  LEAYLHDEAFLKARDKADKKKEKAEQKSREKSLKQAAKEGELESKRDPHLFVLDFHGSID 117
           LE+ L D+  LKA  K++ K EK   K ++   K             P +FVLDF G I 
Sbjct: 59  LESTLLDKDQLKALRKSESKTEKQNSKKKQPEPK-------------PRVFVLDFDGDIK 105

Query: 118 AKEVASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVD 177
           A    SLR E++A+L++A   DEV+LRLE+GGGMVH YGLASSQL R++ AG+PLT+ +D
Sbjct: 106 ASATESLRHEITALLSLATPKDEVVLRLESGGGMVHSYGLASSQLARIRQAGVPLTVCID 165

Query: 178 KVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTL 237
           KVAASGGYMMACI +KI+SAPFAI+GSIGVVAQLPN ++LLKK+DI+FE LTAGEYKRTL
Sbjct: 166 KVAASGGYMMACIGEKIISAPFAILGSIGVVAQLPNVNRLLKKHDIDFEVLTAGEYKRTL 225

Query: 238 TMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDE 297
           T+FGENT+K REKF+++L+ THQLFK+F+  +RP L +D+VATGE W G  A    LVDE
Sbjct: 226 TVFGENTEKGREKFQEDLDITHQLFKNFVSRYRPQLAIDEVATGEVWLGVAALDKQLVDE 285

Query: 298 IQTSDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAGDAADNVLLKLISR 347
           +QTSD+ +    K+  V  L Y ++K L +++   A  + D VLL   SR
Sbjct: 286 LQTSDEYLATKAKTAEVFHLHYAERKSLQERVGLAASGSVDRVLLTWWSR 335